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Philippine President Benigno Aquino III gestures during a press conference after he was proclaimed as winner of the May 10, 2010 presidential election at the House of Representatives in Manila on June 9, 2010. Image Credit: AFP

Manila: The Philippine government faces challenges implementing an accord aimed at ending decades of conflict in resource-rich Mindanao, with the risk of violence from Muslim rebel groups not included in the deal and private armies in the area.

An independent body will conduct a census of rebels, inventory their weapons and schedule the phasing out of arms over the next two years, during which programmes will be put in place to help fighters move to civilian life, according to the agreement signed on January 25 by the government and Moro Islamic Liberation Front in Kuala Lumpur.

Ending one of Southeast Asia’s most entrenched conflicts could mark a key legacy for President Benigno Aquino, with four decades of insurgency killing as many as 200,000 people and stifling development of the southern region. Still, implementing the accord is “easier said than done” given rival rebel groups and private armies operating in the area, Rommel Banlaoi, Executive Director of the Philippine Institute for Peace, Violence and Terrorism Research, said by phone.

“The annex on normalisation made a lot of promises. If they fail to deliver, that will create unmet expectations and trigger more armed violence in Mindanao,” Banlaoi said.

Soldiers clashed on Monday and Sunday with members of a splinter rebel group in the Mindanao provinces of Maguindanao and North Cotabato, Colonel Dickson Hermoso, a spokesman for the Army’s 6th infantry division, said by phone. Soldiers fired artillery rounds as they tried to arrest members of the Bangsamoro Islamic Freedom Fighters, with several rebels wounded as they escaped, he said. No government troops were injured.

Lasting peace could bring investors to Mindanao and unlock mineral deposits worth an estimated $300 billion, political analyst Richard Javad Heydarian said.” It would unlock the natural resources and unleash the human capital of one of the most promising but underdeveloped areas in Southeast Asia,” said Heydarian, who lectures at Ateneo de Manila University. “Given Mindanao’s substantial untapped economic assets, such integration will further boost the Philippine economy.”

Standard Chartered Plc economist Jeff Ng estimates a peace accord could boost Philippine gross domestic product growth by as much as 0.3 percentage point. The $250 billion Philippine economy expanded in 2013 by 7 per cent, the fastest pace in three years, according to the median estimate of economists before a report due on January 30.

Mindanao accounted for 14.4 per cent of Philippine output in 2012, according to government data. It’s also home to much of the country’s Muslim population, about 5 per cent of the Philippines’ more than 100 million people, according to estimates by the US Central Intelligence Agency.

Private armies will be disbanded, six rebel camps will become civilian communities and criminal cases related to the Mindanao conflict will be resolved through pardon and amnesty under the accord, the last of four needed to complete a comprehensive agreement. The peace panels also agreed on jurisdiction over waters to be included in Bangsamoro, the new autonomous Muslim political entity targeted by 2016.

Private armies in Mindanao are “well-entrenched, run by wild oligarchs,” Banlaoi said. “It’s the responsibility of the Bangsamoro government to tame the wild oligarchs.”

Three weeks of fighting in Zamboanga city between government forces and a different Muslim separatist group in September killed at least 203 people and delayed peace talks.

“The MNLF has demonstrated its capability to make trouble,” Banlaoi said, referring to the Moro National Liberation Front headed by Nur Misuari, a former Autonomous Region in Muslim Mindanao governor, which was involved in the Zamboanga standoff. “It can undermine the peace dividends; it can spoil the whole process and even hijack the agenda of the new Bangsamoro government.”

Disarmament will start after the final agreement and be completed before May 2016, when the first regional elections will be held at the same time as national polls, Ghadzali Jaafar, the MILF’s vice-chairman for political affairs, said by phone on Sunday. It will be gradual and “commensurate” with other steps, he said.

“There is no problem with the MILF,” Jaafar said. “The apprehension will be on the honest-to-goodness implementation of the comprehensive agreement by the government.”

The incidence of poverty across the ARMM — a delineation created during a previous attempt at peace — climbed to 48.7 per cent in 2012 from 39.9 per cent in 2009, according to a December report. The Philippine Statistics Authority defines poverty as living on less than $1.20 (Dh4.40) a day.

The government and Muslim rebels agreed on power-sharing last month, on wealth and revenue sharing in July, and on transitional arrangements earlier in 2013.

Benito Lim, a political science professor at Ateneo de Manila University, called the process a short-term arrangement that doesn’t guarantee long-term peace.

An earlier agreement signed with Misuari’s MNLF in 1996 collapsed partly because it “failed to put post-conflict rebuilding mechanisms in place,” Teresita Deles, Aquino’s peace adviser, said in an interview last July.

The Philippines sought support from the Organisation of Islamic Cooperation to review the 1996 deal and merge it with the MILF agreements.

Aquino has asked lawmakers to pass legislation this year creating Bangsamoro, setting the stage for an autonomous Muslim region before his six-year term ends in 2016.

“Our legislators will take on the crucial role of enacting the Bangsamoro Basic Law,” Deles said in a statement after the signing in Kuala Lumpur.

“It has been a difficult road getting to here and we know that the path ahead will continue to be fraught with challenges,” Deles said. “In a world looking for peaceful solutions to all troubles, we are grateful that we have found ours.”